STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR11619.1Hypothetical protein. (56 aa)    
Predicted Functional Partners:
EAR13428.1
OmpA family protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
  
 0.999
EAR12239.1
COG0810 Periplasmic protein TonB, links inner and outer membranes.
   
 
 0.890
EAR11719.1
TPR-domain containing protein; COG0457 FOG: TPR repeat.
  
 
 0.863
adk
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
  
 0.812
EAR13638.1
Tetratricopeptide repeat domain protein; COG0457 FOG: TPR repeat.
  
  
 0.765
EAR13649.1
Probable cytochrome-c peroxidase; COG1858 Cytochrome c peroxidase.
  
   0.723
EAR13607.1
Hypothetical protein.
   
 
 0.683
EAR12897.1
Hypothetical protein.
   
 
 0.683
EAR12033.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
  
 0.679
rpsB
COG0052 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.
   
   0.648
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.