Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAR11627.1Hypothetical protein. (178 aa)    
Predicted Functional Partners:
EAR12188.1
COG2335 Secreted and surface protein containing fasciclin-like repeats.
 
      0.669
EAR12458.1
beta-N-acetylglucosaminidase; COG1472 Beta-glucosidase-related glycosidases.
   
 
 0.619
EAR11626.1
COG1808 Predicted membrane protein.
       0.584
EAR13126.1
COG0768 Cell division protein FtsI/penicillin-binding protein 2.
    
 0.535
EAR13832.1
Hypothetical protein.
    
 0.535
EAR13965.1
COG0768 Cell division protein FtsI/penicillin-binding protein 2.
    
 0.535
EAR13166.1
Hypothetical protein; COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases.
    
 
 0.507
EAR13859.1
Hypothetical protein.
    
 
 0.507
EAR12518.1
Hypothetical protein; COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific.
  
     0.440
EAR13256.1
Hemagglutinin; COG1705 Muramidase (flagellum-specific).
  
 
 0.433
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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