Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAR11672.1Hypothetical protein. (477 aa)    
Predicted Functional Partners:
EAR11671.1
Putative outer membrane protein, probably involved in nutrient binding; COG4206 Outer membrane cobalamin receptor protein.
     0.948
EAR12475.1
Putative ParB-like chromosome partitioning protein; COG1475 Predicted transcriptional regulators; Belongs to the ParB family.
  
 
 0.730
EAR13924.1
Putative outer membrane protein probably involved in nutrient binding; COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
 
   0.628
EAR11673.1
Hypothetical protein.
       0.623
EAR13406.1
Ferric enterobactin receptor; COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.603
EAR13410.1
Ferric enterobactin receptor; COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.560
EAR13407.1
Ferric enterobactin receptor; COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.557
EAR13923.1
Putative outer membrane protein probably involved in nutrient binding.
  
 
   0.555
EAR11677.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
 
   0.523
gatB
aspartyl-tRNA synthetase; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.
  
    0.509
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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