Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EAR11771.1Putative outer membrane protein, probably involved in nutrient binding; COG1629 Outer membrane receptor proteins, mostly Fe transport. (1064 aa)    
Predicted Functional Partners:
EAR11772.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
 
     0.945
EAR11774.1
COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases.
 
     0.943
EAR11773.1
Hypothetical protein; COG0591 Na+/proline symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.942
EAR11775.1
Hypothetical protein; COG0500 SAM-dependent methyltransferases.
       0.641
EAR13101.1
Hypothetical protein.
  
 
   0.555
EAR11770.1
Hypothetical protein; COG0535 Predicted Fe-S oxidoreductases.
 
     0.497
EAR12239.1
COG0810 Periplasmic protein TonB, links inner and outer membranes.
   
  0.494
EAR11776.1
COG3222 Uncharacterized protein conserved in bacteria.
       0.493
EAR12932.1
Hypothetical protein.
  
     0.492
EAR13746.1
Hypothetical protein.
  
     0.473
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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