Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EAR11772.1Hypothetical protein; COG1196 Chromosome segregation ATPases. (479 aa)    
Predicted Functional Partners:
EAR11774.1
COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases.
 
    0.947
EAR11773.1
Hypothetical protein; COG0591 Na+/proline symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.946
EAR11771.1
Putative outer membrane protein, probably involved in nutrient binding; COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
     0.945
EAR12475.1
Putative ParB-like chromosome partitioning protein; COG1475 Predicted transcriptional regulators; Belongs to the ParB family.
  
 
 0.730
EAR11775.1
Hypothetical protein; COG0500 SAM-dependent methyltransferases.
       0.655
EAR12932.1
Hypothetical protein.
  
     0.596
EAR11516.1
Putative outer membrane protein probably involved in nutrient binding; COG4771 Outer membrane receptor for ferrienterochelin and colicins.
  
 
   0.557
EAR13252.1
Hypothetical protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.
  
     0.540
EAR13101.1
Hypothetical protein.
  
 
   0.522
gatB
aspartyl-tRNA synthetase; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.
  
    0.509
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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