Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAR11806.1Fumarate reductase/succinate dehydrogenase flavoprotein-like; COG2081 Predicted flavoproteins. (404 aa)    
Predicted Functional Partners:
EAR11807.1
Hypothetical protein; COG1577 Mevalonate kinase.
       0.773
EAR11808.1
COG1257 Hydroxymethylglutaryl-CoA reductase; Belongs to the HMG-CoA reductase family.
       0.664
EAR13819.1
Phenylacetate-CoA oxygenase/reductase, PaaK subunit; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
     
  0.520
EAR11809.1
Hypothetical protein; COG0330 Membrane protease subunits, stomatin/prohibitin homologs.
       0.449
EAR11805.1
Hypothetical protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
       0.446
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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