Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAR13143.1Branched-chain amino acid aminotransferase; COG0840 Methyl-accepting chemotaxis protein. (169 aa)    
Predicted Functional Partners:
EAR13142.1
Hypothetical protein.
       0.642
EAR13144.1
COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
       0.591
EAR12183.1
Hypothetical protein.
  
     0.482
EAR13141.1
Hypothetical protein.
       0.438
EAR13147.1
Hypothetical protein.
 
     0.437
EAR13957.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.424
EAR13145.1
Pyrroloquinoline quinone biosynthesis protein PqqB; COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I.
       0.411
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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