Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAR13145.1Pyrroloquinoline quinone biosynthesis protein PqqB; COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I. (314 aa)    
Predicted Functional Partners:
EAR13147.1
Hypothetical protein.
 
     0.686
EAR13146.1
Hypothetical protein.
       0.645
EAR13144.1
COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
       0.574
EAR12140.1
Hypothetical protein; COG5309 Exo-beta-1,3-glucanase.
  
     0.459
EAR13143.1
Branched-chain amino acid aminotransferase; COG0840 Methyl-accepting chemotaxis protein.
       0.411
lipA
Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
    
 0.407
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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