STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR13150.1COG2259 Predicted membrane protein. (322 aa)    
Predicted Functional Partners:
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
      0.913
EAR13151.1
Hypothetical protein.
 
     0.893
EAR12283.1
Hypothetical protein; COG2971 Predicted N-acetylglucosamine kinase.
  
     0.754
EAR13269.1
Hypothetical protein.
  
     0.740
EAR12495.1
Site-specific recombinase, phage integrase family/ribosomal subunit interface protein; COG1544 Ribosome-associated protein Y (PSrp-1).
  
     0.740
EAR13760.1
Hypothetical protein.
  
     0.735
EAR12864.1
Hypothetical protein.
  
     0.719
EAR13558.1
TPR domain protein; COG0457 FOG: TPR repeat.
  
  
  0.718
EAR13358.1
Hypothetical protein.
  
     0.707
EAR13525.1
COG1587 Uroporphyrinogen-III synthase.
  
     0.694
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.