Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
dacAPutative transmembrane protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria. (258 aa)    
Predicted Functional Partners:
EAR12685.1
COG1109 Phosphomannomutase.
   
 
 0.814
EAR12220.1
Putative phosphoglucomutase/phosphomannomutase family protein; COG1109 Phosphomannomutase.
   
 
 0.814
EAR12814.1
Hypothetical protein.
 
  
 0.746
EAR13153.1
Putative dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.
       0.704
EAR13152.1
Hypothetical protein; COG1611 Predicted Rossmann fold nucleotide-binding protein; Belongs to the LOG family.
       0.639
EAR13151.1
Hypothetical protein.
       0.549
EAR12534.1
Putative transmembrane HD family protein; COG1480 Predicted membrane-associated HD superfamily hydrolase.
 
  
 0.543
EAR13150.1
COG2259 Predicted membrane protein.
       0.474
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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