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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR13177.1Hypothetical protein; COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases. (305 aa)    
Predicted Functional Partners:
EAR13178.1
Hypothetical protein; COG1577 Mevalonate kinase.
 
   
 0.861
EAR11798.1
Polyprenyl synthetase; COG0142 Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 
 0.831
atpD
ATP synthase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
   
  0.796
EAR13040.1
FAD linked oxidase-like protein; COG0277 FAD/FMN-containing dehydrogenases.
 
  
 0.771
EAR12636.1
Amino acid adenylation; COG0001 Glutamate-1-semialdehyde aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.727
EAR12713.1
FAD-linked oxidoreductase; COG0277 FAD/FMN-containing dehydrogenases.
    
 0.724
EAR13176.1
Putative ribosomal large subunit pseudouridine synthase; COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; Belongs to the pseudouridine synthase RsuA family.
       0.707
EAR13818.1
Hypothetical protein; COG1280 Putative threonine efflux protein.
  
     0.682
EAR13624.1
Hypothetical protein; COG0500 SAM-dependent methyltransferases.
 
 0.639
EAR13043.1
COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase.
 
   
 0.598
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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