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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR13186.1Hypothetical protein. (219 aa)    
Predicted Functional Partners:
EAR13189.1
Putative cationic 19 kDa outer membrane protein precursor; COG2825 Outer membrane protein.
 
 
   0.849
EAR13188.1
COG4775 Outer membrane protein/protective antigen OMA87.
   
   0.843
EAR13184.1
Acetoin utilization protein, putative; COG0517 FOG: CBS domain.
 
     0.819
EAR13187.1
Undecaprenyl pyrophosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
  
    0.801
EAR13558.1
TPR domain protein; COG0457 FOG: TPR repeat.
  
     0.757
EAR13428.1
OmpA family protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
  
 
 0.756
EAR13498.1
Hypothetical protein.
  
     0.747
EAR13190.1
Glutamate racemase; COG2825 Outer membrane protein.
   
   0.724
EAR13972.1
porT protein.
 
     0.717
EAR13358.1
Hypothetical protein.
  
     0.713
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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