Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EAR13188.1COG4775 Outer membrane protein/protective antigen OMA87. (864 aa)    
Predicted Functional Partners:
EAR12155.1
COG4105 DNA uptake lipoprotein.
 
 
 0.975
EAR13187.1
Undecaprenyl pyrophosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
 
    0.969
EAR13168.1
Putative outer membrane protein.
  
 
 
 0.962
EAR13189.1
Putative cationic 19 kDa outer membrane protein precursor; COG2825 Outer membrane protein.
 
  
 0.867
EAR13186.1
Hypothetical protein.
   
   0.838
EAR11723.1
Rotamase; COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1.
    
   0.823
EAR12024.1
COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1.
    
   0.823
EAR13686.1
COG3210 Large exoproteins involved in heme utilization or adhesion.
  
 
 0.816
fabZ
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily.
 
  
 0.814
EAR13519.1
Hypothetical protein.
  
 
   0.804
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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