STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR13304.1AAA ATPase, CDC48; COG0464 ATPases of the AAA+ class. (717 aa)    
Predicted Functional Partners:
EAR13302.1
Hypothetical protein; COG0071 Molecular chaperone (small heat shock protein); Belongs to the small heat shock protein (HSP20) family.
 
  
 0.941
EAR13303.1
COG0003 Oxyanion-translocating ATPase.
 
 
 
 0.931
EAR13305.1
Hypothetical protein; COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain.
 
 
 0.931
EAR13306.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
 
     0.905
EAR13437.1
COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein.
   
 0.876
EAR13307.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
 
     0.864
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
 
 
  0.856
EAR13299.1
ATPase; COG0714 MoxR-like ATPases.
 
     0.850
EAR12425.1
Heat shock protein 90; COG0326 Molecular chaperone, HSP90 family.
   
 0.846
EAR13712.1
Hypothetical protein; COG0666 FOG: Ankyrin repeat.
    
 0.830
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.