Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAR13308.1Hypothetical protein; COG0419 ATPase involved in DNA repair. (70 aa)    
Predicted Functional Partners:
EAR13307.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
     
 0.791
EAR13306.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
     
 0.669
EAR13305.1
Hypothetical protein; COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain.
       0.639
EAR13304.1
AAA ATPase, CDC48; COG0464 ATPases of the AAA+ class.
       0.592
EAR13303.1
COG0003 Oxyanion-translocating ATPase.
       0.533
EAR13302.1
Hypothetical protein; COG0071 Molecular chaperone (small heat shock protein); Belongs to the small heat shock protein (HSP20) family.
       0.529
EAR13301.1
Putative gas vesicle synthesis protein; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth.
     
 0.524
EAR13312.1
Hypothetical protein.
     
 0.425
EAR13309.1
Hypothetical protein.
       0.422
EAR13310.1
Hypothetical protein; COG0419 ATPase involved in DNA repair.
       0.421
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
Server load: low (12%) [HD]