Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EAR13314.1Hypothetical protein; COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor). (114 aa)    
Predicted Functional Partners:
EAR13312.1
Hypothetical protein.
 
   
 0.855
EAR13310.1
Hypothetical protein; COG0419 ATPase involved in DNA repair.
 
     0.853
EAR13311.1
Hypothetical protein.
 
     0.853
EAR13301.1
Putative gas vesicle synthesis protein; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth.
 
   
 0.841
EAR13307.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
 
   
 0.830
EAR13306.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
 
   
 0.827
EAR13295.1
Gas vesicle synthesis protein GvpA; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth.
 
   
 0.818
EAR13299.1
ATPase; COG0714 MoxR-like ATPases.
 
   
 0.814
EAR13305.1
Hypothetical protein; COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain.
 
     0.809
EAR13302.1
Hypothetical protein; COG0071 Molecular chaperone (small heat shock protein); Belongs to the small heat shock protein (HSP20) family.
 
     0.694
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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