Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAR13337.1COG1629 Outer membrane receptor proteins, mostly Fe transport. (656 aa)    
Predicted Functional Partners:
EAR12239.1
COG0810 Periplasmic protein TonB, links inner and outer membranes.
 
 
 
 0.705
EAR13954.1
Siderophore (surfactin) biosynthesis regulatory protein; COG2091 Phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily.
  
     0.697
EAR12374.1
Hypothetical protein.
  
     0.658
EAR11613.1
Hypothetical protein.
  
     0.635
EAR13262.1
Hypothetical protein.
  
     0.619
EAR13508.1
Hypothetical protein.
  
     0.587
EAR13974.1
COG0729 Outer membrane protein.
  
     0.585
EAR11934.1
Putative TonB-dependent outer membrane receptor protein.
  
     0.584
EAR13888.1
Hypothetical protein.
  
     0.580
EAR11528.1
Hypothetical protein.
  
     0.578
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.