STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR13413.1Putative magnesium chelatase; COG0714 MoxR-like ATPases. (329 aa)    
Predicted Functional Partners:
EAR13414.1
Hypothetical protein; COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain).
  
 0.930
EAR13416.1
batA protein; COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain.
 
 
 0.902
EAR13417.1
COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain.
 
 
 0.864
EAR13415.1
Putative conserved membrane exported protein.
 
    0.668
EAR13231.1
Hypothetical protein; COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain).
 
  
 0.576
EAR13419.1
Hypothetical protein.
 
     0.561
EAR13418.1
Aerotolerance-related exported protein; COG0457 FOG: TPR repeat.
 
     0.539
EAR13412.1
COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
       0.532
EAR13420.1
Aerotolerance-related exported protein; COG0457 FOG: TPR repeat.
 
     0.432
EAR13411.1
Putative anti-sigma factor; COG3712 Fe2+-dicitrate sensor, membrane component.
       0.405
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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