Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAR13443.1Hypothetical protein. (163 aa)    
Predicted Functional Partners:
EAR11764.1
Hypothetical protein.
  
     0.570
EAR12687.1
Hypothetical protein.
  
     0.556
EAR12446.1
Hypothetical protein.
  
     0.546
EAR13444.1
COG0629 Single-stranded DNA-binding protein.
       0.531
EAR11745.1
Hypothetical protein.
  
     0.402
EAR12526.1
COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily.
  
     0.400
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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