Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAR13466.1Hypothetical protein. (929 aa)    
Predicted Functional Partners:
EAR13839.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.626
EAR13467.1
COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family.
       0.492
EAR13902.1
Putative membrane associated hydrolase; COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.489
EAR12418.1
COG2866 Predicted carboxypeptidase.
 
     0.447
EAR13465.1
COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit.
       0.437
EAR13464.1
COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit.
       0.430
EAR13090.1
Secreted protein containing N-terminal zinc-dependent carboxypeptidase related domain; COG2866 Predicted carboxypeptidase.
  
     0.429
EAR13007.1
Hypothetical protein; COG0406 Fructose-2,6-bisphosphatase.
  
     0.416
EAR11722.1
Hypothetical protein; COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold.
  
     0.412
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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