Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAR13536.1Putative anti-sigma factor; COG3712 Fe2+-dicitrate sensor, membrane component. (393 aa)    
Predicted Functional Partners:
EAR12937.1
COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
  
   0.805
EAR13537.1
Putative outer membrane protein, probably involved in nutrient binding; COG4771 Outer membrane receptor for ferrienterochelin and colicins.
 
     0.800
EAR13535.1
COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
  
   0.785
EAR13538.1
Putative outer membrane protein, probably involved in nutrient binding.
 
  
  0.784
EAR13611.1
Putative transmembrane sensor; COG3712 Fe2+-dicitrate sensor, membrane component.
  
  
 
0.757
EAR13411.1
Putative anti-sigma factor; COG3712 Fe2+-dicitrate sensor, membrane component.
  
  
 
0.671
EAR13925.1
Putative anti-sigma factor; COG3712 Fe2+-dicitrate sensor, membrane component.
  
  
 
0.662
EAR13926.1
COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
  
   0.651
EAR13412.1
COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
  
   0.645
EAR13544.1
COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase.
 
     0.624
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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