Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EAR13537.1Putative outer membrane protein, probably involved in nutrient binding; COG4771 Outer membrane receptor for ferrienterochelin and colicins. (1173 aa)    
Predicted Functional Partners:
EAR13538.1
Putative outer membrane protein, probably involved in nutrient binding.
 
 
   0.962
EAR13543.1
Hypothetical protein.
 
     0.875
EAR13541.1
Glucose/galactose transporter; COG0738 Fucose permease.
 
     0.870
EAR13536.1
Putative anti-sigma factor; COG3712 Fe2+-dicitrate sensor, membrane component.
 
     0.800
EAR13540.1
COG2120 Uncharacterized proteins, LmbE homologs.
 
     0.758
EAR13539.1
COG2120 Uncharacterized proteins, LmbE homologs.
 
     0.745
EAR13542.1
ROK family protein; COG1940 Transcriptional regulator/sugar kinase.
 
     0.719
EAR13923.1
Putative outer membrane protein probably involved in nutrient binding.
 
 
   0.695
EAR11517.1
Putative outer membrane protein probably involved in nutrient binding.
 
     0.621
EAR13224.1
Hypothetical protein.
  
 
   0.598
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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