Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EAR13545.1Sodium:dicarboxylate cotransporter; COG0471 Di- and tricarboxylate transporters. (512 aa)    
Predicted Functional Partners:
EAR13543.1
Hypothetical protein.
 
     0.595
EAR13544.1
COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase.
       0.542
EAR13541.1
Glucose/galactose transporter; COG0738 Fucose permease.
       0.499
EAR13542.1
ROK family protein; COG1940 Transcriptional regulator/sugar kinase.
       0.499
EAR13537.1
Putative outer membrane protein, probably involved in nutrient binding; COG4771 Outer membrane receptor for ferrienterochelin and colicins.
 
     0.427
EAR13539.1
COG2120 Uncharacterized proteins, LmbE homologs.
       0.421
EAR13540.1
COG2120 Uncharacterized proteins, LmbE homologs.
       0.421
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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