STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR13561.1Hypothetical protein. (235 aa)    
Predicted Functional Partners:
EAR13567.1
Hypothetical protein; COG1695 Predicted transcriptional regulators.
 
     0.930
EAR13563.1
Hypothetical protein; COG0471 Di- and tricarboxylate transporters.
 
    
0.839
EAR13562.1
Hypothetical protein.
       0.773
EAR13564.1
Hypothetical protein.
       0.773
EAR13565.1
Hypothetical protein.
       0.773
EAR13566.1
Hypothetical protein.
       0.773
EAR13560.1
COG4485 Predicted membrane protein.
 
     0.740
EAR13568.1
Hypothetical protein.
       0.693
EAR13455.1
Hypothetical protein.
  
     0.612
EAR13855.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
     0.612
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.