Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAR13637.1Hypothetical protein; COG0532 Translation initiation factor 2 (IF-2; GTPase). (109 aa)    
Predicted Functional Partners:
EAR13638.1
Tetratricopeptide repeat domain protein; COG0457 FOG: TPR repeat.
       0.679
EAR12442.1
Hypothetical protein.
  
     0.675
EAR12177.1
Antibiotic biosynthesis monooxygenase domain protein.
  
     0.634
EAR13635.1
Magnesium transporter; Acts as a magnesium transporter.
       0.631
ksgA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
       0.631
EAR13265.1
Hypothetical protein; COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family; Belongs to the arginase family.
  
     0.544
EAR13181.1
Hypothetical protein.
  
     0.511
EAR13727.1
Hypothetical protein.
  
     0.454
EAR12216.1
Hypothetical protein; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.
  
     0.448
EAR13639.1
seryl-tRNA synthetase.
       0.445
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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