Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAR13643.1COG0520 Selenocysteine lyase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. (404 aa)    
Predicted Functional Partners:
EAR13646.1
ABC transporter, ATP-binding protein; COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component.
  
 0.993
EAR13645.1
FeS assembly protein SufD; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.
 
 0.992
EAR13647.1
Hypothetical protein; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.
 
 0.992
EAR13372.1
COG2166 SufE protein probably involved in Fe-S center assembly.
 0.984
EAR13373.1
Hypothetical protein; COG2151 Predicted metal-sulfur cluster biosynthetic enzyme.
  
 0.934
EAR13237.1
Probable thioredoxin resuctase; COG0492 Thioredoxin reductase.
   
 
  0.876
EAR12327.1
COG0492 Thioredoxin reductase.
   
 
  0.876
EAR13789.1
Probable thioredoxin resuctase; COG0492 Thioredoxin reductase.
   
 
  0.872
EAR11896.1
COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2.
  
 
 0.801
EAR12194.1
Nitrogenase metalloclusters biosynthesis protein; COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes.
 
 
0.726
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.