STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR13665.1COG0642 Signal transduction histidine kinase. (469 aa)    
Predicted Functional Partners:
EAR12891.1
FixL-related histidine kinase; COG2202 FOG: PAS/PAC domain.
 
 
 0.978
EAR12648.1
Sensory transduction histidine kinase; COG0784 FOG: CheY-like receiver.
 
 
0.975
EAR12335.1
C4-dicarboxylate transport transcriptional regulatory protein; COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains.
 0.972
EAR13851.1
COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
  
 
 0.899
EAR13293.1
Sensory box sensor histidine kinase; COG0784 FOG: CheY-like receiver.
 
0.883
EAR13990.1
Two-component hybrid sensor and regulator; COG0784 FOG: CheY-like receiver.
 
 
 0.859
EAR13991.1
COG0642 Signal transduction histidine kinase.
 
  
 0.834
EAR12704.1
Putative two component system response regulator; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
  
 
 0.825
EAR13294.1
Regulator protein pilR; COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains.
 0.820
EAR12817.1
Two-component system, transcriptional regulatory protein; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
  
 
 0.786
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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