Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EAR13678.1COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. (218 aa)    
Predicted Functional Partners:
EAR12648.1
Sensory transduction histidine kinase; COG0784 FOG: CheY-like receiver.
 
 0.993
EAR12891.1
FixL-related histidine kinase; COG2202 FOG: PAS/PAC domain.
  
 0.989
EAR13158.1
Histidine kinase sensor protein; COG0457 FOG: TPR repeat.
 
 0.952
EAR13293.1
Sensory box sensor histidine kinase; COG0784 FOG: CheY-like receiver.
  
 0.864
EAR11964.1
Sensory transduction histidine kinase; COG2202 FOG: PAS/PAC domain.
   
 0.758
EAR13991.1
COG0642 Signal transduction histidine kinase.
   
 0.707
EAR12649.1
Sensory transduction histidine kinase; COG2202 FOG: PAS/PAC domain.
   
 0.707
EAR13679.1
Hypothetical protein.
       0.615
EAR12148.1
Hypothetical protein; COG3292 Predicted periplasmic ligand-binding sensor domain.
   
 0.605
EAR11719.1
TPR-domain containing protein; COG0457 FOG: TPR repeat.
    
 0.535
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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