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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR13678.1COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. (218 aa)    
Predicted Functional Partners:
EAR12648.1
Sensory transduction histidine kinase; COG0784 FOG: CheY-like receiver.
 
 0.999
EAR12891.1
FixL-related histidine kinase; COG2202 FOG: PAS/PAC domain.
  
 0.991
EAR13158.1
Histidine kinase sensor protein; COG0457 FOG: TPR repeat.
 
 0.959
EAR13293.1
Sensory box sensor histidine kinase; COG0784 FOG: CheY-like receiver.
  
 0.867
EAR11964.1
Sensory transduction histidine kinase; COG2202 FOG: PAS/PAC domain.
  
 0.737
EAR13991.1
COG0642 Signal transduction histidine kinase.
   
 0.710
EAR12649.1
Sensory transduction histidine kinase; COG2202 FOG: PAS/PAC domain.
   
 0.710
EAR12148.1
Hypothetical protein; COG3292 Predicted periplasmic ligand-binding sensor domain.
  
 0.654
EAR13679.1
Hypothetical protein.
       0.615
EAR13850.1
COG0642 Signal transduction histidine kinase.
 
 0.549
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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