STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR13686.1COG3210 Large exoproteins involved in heme utilization or adhesion. (654 aa)    
Predicted Functional Partners:
EAR12155.1
COG4105 DNA uptake lipoprotein.
   
 
 0.928
EAR13685.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
     0.893
EAR13682.1
Putative patatin-like phospholipase; COG1752 Predicted esterase of the alpha-beta hydrolase superfamily.
  
 
 0.834
EAR13188.1
COG4775 Outer membrane protein/protective antigen OMA87.
  
 
 0.820
EAR13974.1
COG0729 Outer membrane protein.
  
 
 0.820
EAR11746.1
Tetratricopeptide repeat family protein; COG0457 FOG: TPR repeat.
  
    0.656
EAR13658.1
Membrane-associated zinc metalloprotease; COG0750 Predicted membrane-associated Zn-dependent proteases 1.
   
    0.467
EAR13163.1
Peptidylprolyl cis-trans isomerase; COG0760 Parvulin-like peptidyl-prolyl isomerase.
   
 
 0.466
EAR12205.1
COG0760 Parvulin-like peptidyl-prolyl isomerase.
   
 
 0.466
EAR12206.1
Hypothetical protein; COG0760 Parvulin-like peptidyl-prolyl isomerase.
   
 
 0.466
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.