Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAR13702.1Hypothetical protein. (186 aa)    
Predicted Functional Partners:
EAR13358.1
Hypothetical protein.
  
   
 0.835
EAR12285.1
Lipoprotein, putative.
  
   
 0.834
EAR12180.1
Hypothetical protein; COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component.
  
   
 0.821
EAR13703.1
COG1253 Hemolysins and related proteins containing CBS domains.
       0.788
EAR13704.1
COG0629 Single-stranded DNA-binding protein.
       0.788
EAR13823.1
Hypothetical protein; COG0687 Spermidine/putrescine-binding periplasmic protein.
  
   
 0.778
EAR13328.1
Hypothetical protein.
  
     0.768
EAR13558.1
TPR domain protein; COG0457 FOG: TPR repeat.
  
     0.765
EAR12862.1
Hypothetical protein.
  
     0.761
EAR13972.1
porT protein.
  
     0.744
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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