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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR13714.1Outer membrane receptor for transport of vitamin B, putative; COG1629 Outer membrane receptor proteins, mostly Fe transport. (682 aa)    
Predicted Functional Partners:
EAR13715.1
Hypothetical protein.
 
     0.925
EAR13713.1
Hypothetical protein; COG0060 Isoleucyl-tRNA synthetase.
 
     0.792
EAR13711.1
Hypothetical protein.
 
     0.724
EAR13712.1
Hypothetical protein; COG0666 FOG: Ankyrin repeat.
 
    0.683
EAR13710.1
Putative Oxidoreductase, FAD-binding protein; COG3182 Uncharacterized iron-regulated membrane protein.
 
     0.676
EAR13101.1
Hypothetical protein.
  
 
   0.454
EAR12239.1
COG0810 Periplasmic protein TonB, links inner and outer membranes.
   
   0.447
EAR13188.1
COG4775 Outer membrane protein/protective antigen OMA87.
  
     0.446
EAR11841.1
Hypothetical protein.
  
    0.423
EAR12926.1
COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.415
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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