STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR13722.1Hypothetical protein; COG0477 Permeases of the major facilitator superfamily. (80 aa)    
Predicted Functional Partners:
EAR13721.1
Putative cell division protein; Required for cell division and gliding motility. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
     0.845
uppP
Putative bacitracin resistance protein; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
       0.818
EAR11546.1
Hypothetical protein.
  
     0.773
EAR12805.1
Hypothetical protein.
  
     0.764
EAR13261.1
Hypothetical protein.
  
     0.763
truB
Putative tRNA pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
       0.762
EAR13718.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
     0.744
EAR13256.1
Hemagglutinin; COG1705 Muramidase (flagellum-specific).
  
     0.717
EAR12864.1
Hypothetical protein.
  
     0.709
EAR13717.1
COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase).
 
     0.649
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.