STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR13727.1Hypothetical protein. (161 aa)    
Predicted Functional Partners:
EAR13357.1
Hypothetical protein.
  
     0.759
EAR13374.1
Hypothetical protein.
  
     0.758
EAR13432.1
Hypothetical protein.
  
     0.740
EAR13726.1
Putative lycopene cyclase; COG2303 Choline dehydrogenase and related flavoproteins.
 
     0.659
EAR11613.1
Hypothetical protein.
  
     0.623
bshC
COG4365 Uncharacterized protein conserved in bacteria; Belongs to the BshC family.
  
     0.615
EAR12183.1
Hypothetical protein.
  
     0.615
EAR12407.1
Hypothetical protein.
  
     0.595
EAR13725.1
Ribosomal large subunit pseudouridine synthase A; COG0564 Pseudouridylate synthases, 23S RNA-specific.
       0.594
EAR12834.1
Hypothetical protein.
  
     0.572
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.