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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR13746.1Hypothetical protein. (655 aa)    
Predicted Functional Partners:
EAR13747.1
Hypothetical protein.
       0.773
EAR13748.1
Hypothetical protein.
       0.773
EAR13749.1
Putative 5'(3')-deoxyribonucleotidase; COG4502 Uncharacterized protein conserved in bacteria.
 
     0.757
EAR13750.1
COG4487 Uncharacterized protein conserved in bacteria.
       0.666
EAR13745.1
Hypothetical protein.
       0.592
EAR11773.1
Hypothetical protein; COG0591 Na+/proline symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
     0.485
EAR11771.1
Putative outer membrane protein, probably involved in nutrient binding; COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.473
EAR11774.1
COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases.
  
     0.465
EAR11772.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
  
     0.414
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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