Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAR13747.1Hypothetical protein. (255 aa)    
Predicted Functional Partners:
EAR12648.1
Sensory transduction histidine kinase; COG0784 FOG: CheY-like receiver.
   
 0.883
EAR12891.1
FixL-related histidine kinase; COG2202 FOG: PAS/PAC domain.
   
 0.875
EAR13746.1
Hypothetical protein.
       0.773
EAR13748.1
Hypothetical protein.
       0.773
EAR13749.1
Putative 5'(3')-deoxyribonucleotidase; COG4502 Uncharacterized protein conserved in bacteria.
       0.701
EAR13750.1
COG4487 Uncharacterized protein conserved in bacteria.
       0.664
EAR13293.1
Sensory box sensor histidine kinase; COG0784 FOG: CheY-like receiver.
    
 0.645
EAR13745.1
Hypothetical protein.
       0.592
EAR13991.1
COG0642 Signal transduction histidine kinase.
    
 0.470
EAR12649.1
Sensory transduction histidine kinase; COG2202 FOG: PAS/PAC domain.
    
 0.470
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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