STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR13793.1Hypothetical protein. (256 aa)    
Predicted Functional Partners:
EAR13792.1
COG3483 Tryptophan 2,3-dioxygenase (vermilion).
   
   0.715
EAR13914.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
     0.643
EAR12466.1
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
 
    0.603
pgi
COG0166 Glucose-6-phosphate isomerase; Belongs to the GPI family.
       0.602
EAR13188.1
COG4775 Outer membrane protein/protective antigen OMA87.
  
     0.598
EAR13177.1
Hypothetical protein; COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases.
  
     0.589
EAR13405.1
Putative UDP-2,3-diacylglucosamine hydrolase; COG2908 Uncharacterized protein conserved in bacteria.
  
     0.565
EAR13794.1
Peptidase, M23/M37 family protein; COG0739 Membrane proteins related to metalloendopeptidases.
       0.501
fabZ
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily.
 
     0.489
EAR13276.1
Hypothetical protein.
 
    0.462
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.