Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAR13797.1Hypothetical protein. (141 aa)    
Predicted Functional Partners:
EAR13374.1
Hypothetical protein.
  
     0.560
EAR13798.1
Hypothetical protein; COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase.
       0.551
EAR13799.1
Putative acyl-ACP desaturase.
       0.545
EAR13166.1
Hypothetical protein; COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases.
  
     0.539
EAR13432.1
Hypothetical protein.
  
     0.516
mraW
S-adenosyl-methyltransferase MraW.
  
     0.514
EAR13818.1
Hypothetical protein; COG1280 Putative threonine efflux protein.
  
     0.494
EAR11995.1
COG0739 Membrane proteins related to metalloendopeptidases.
  
     0.489
EAR13796.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
       0.486
EAR12457.1
Hypothetical protein.
  
     0.466
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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