Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EAR13802.1Hypothetical protein; COG1196 Chromosome segregation ATPases. (917 aa)    
Predicted Functional Partners:
EAR13871.1
COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains).
 
  
 0.889
EAR12863.1
COG0210 Superfamily I DNA and RNA helicases.
   
  0.699
EAR12297.1
LysM-repeat proteins and domains; COG1388 FOG: LysM repeat.
  
    0.659
EAR12333.1
Hypothetical protein; COG1846 Transcriptional regulators.
  
     0.628
EAR12653.1
Hypothetical protein; COG0500 SAM-dependent methyltransferases.
 
     0.624
EAR12808.1
Hypothetical protein.
  
     0.619
EAR13270.1
Hypothetical protein.
  
     0.599
EAR12346.1
Hypothetical protein; COG0419 ATPase involved in DNA repair.
  
     0.591
EAR13859.1
Hypothetical protein.
  
     0.570
EAR11613.1
Hypothetical protein.
 
     0.569
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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