Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAR13832.1Hypothetical protein. (292 aa)    
Predicted Functional Partners:
EAR13119.1
Cell division protein FtsQ.
  
 
 0.804
EAR13167.1
Hypothetical protein; COG0457 FOG: TPR repeat.
 
     0.792
EAR13887.1
Hypothetical protein.
  
     0.775
EAR13886.1
Hypothetical protein.
  
     0.774
EAR12206.1
Hypothetical protein; COG0760 Parvulin-like peptidyl-prolyl isomerase.
  
     0.758
EAR13501.1
Hypothetical protein.
  
     0.756
EAR13884.1
MotA/TolQ/ExbB proton channel family protein; COG0811 Biopolymer transport proteins.
  
   
 0.755
EAR12201.1
Hypothetical protein.
  
     0.754
EAR13269.1
Hypothetical protein.
 
     0.711
EAR12302.1
Uridine kinase.
 
 
 0.693
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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