Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAR13836.1COG2954 Uncharacterized protein conserved in bacteria. (157 aa)    
Predicted Functional Partners:
EAR12648.1
Sensory transduction histidine kinase; COG0784 FOG: CheY-like receiver.
    
  0.915
EAR12891.1
FixL-related histidine kinase; COG2202 FOG: PAS/PAC domain.
    
  0.908
ndk
Nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
     
 0.874
EAR12876.1
GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
     
  0.869
EAR13694.1
Molybdenum cofactor biosynthesis protein MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
     
  0.746
ribB
Putative riboflavin biosynthesis protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
     
  0.746
folE-3
COG0302 GTP cyclohydrolase I.
     
  0.746
EAR12314.1
Hypothetical protein; COG0302 GTP cyclohydrolase I.
     
  0.621
EAR13293.1
Sensory box sensor histidine kinase; COG0784 FOG: CheY-like receiver.
    
  0.575
EAR11964.1
Sensory transduction histidine kinase; COG2202 FOG: PAS/PAC domain.
     
  0.561
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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