Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAR13884.1MotA/TolQ/ExbB proton channel family protein; COG0811 Biopolymer transport proteins. (240 aa)    
Predicted Functional Partners:
EAR13886.1
Hypothetical protein.
 
 
 0.990
EAR13887.1
Hypothetical protein.
 
 
 0.987
EAR12238.1
Putative tansport related protein; COG0848 Biopolymer transport protein.
 
 
 0.902
EAR12239.1
COG0810 Periplasmic protein TonB, links inner and outer membranes.
 
 
 0.897
EAR13885.1
Hypothetical protein.
       0.773
EAR13832.1
Hypothetical protein.
  
   
 0.755
EAR13167.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
     0.705
EAR13501.1
Hypothetical protein.
  
     0.661
EAR13085.1
Isopropylmalate isomerase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
 
      0.633
EAR13763.1
acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
 
      0.629
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.