Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAR13938.1Hypothetical protein; COG3474 Cytochrome c2. (433 aa)    
Predicted Functional Partners:
EAR13939.1
Molybdopterin oxidoreductase, iron-sulfur binding subunit; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.
 
 0.997
EAR13940.1
Molybdopterin oxidoredutase membrane subunit; COG5557 Polysulphide reductase.
 
 
  0.989
EAR13941.1
Hypothetical protein.
 
 
   0.986
EAR13943.1
Hypothetical protein; COG2217 Cation transport ATPase.
 
 
   0.985
EAR13942.1
Hypothetical protein; COG2010 Cytochrome c, mono- and diheme variants.
 
 
   0.982
EAR13944.1
Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 0.908
EAR13945.1
COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1; Belongs to the heme-copper respiratory oxidase family.
  
 0.883
EAR13510.1
COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3.
 
 0.837
EAR13511.1
Hypothetical protein; COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3.
  
 0.796
EAR12229.1
Large subunit of NADH-dependent glutamate synthase; COG0067 Glutamate synthase domain 1.
     
 0.681
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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