Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAR13964.1Hypothetical protein. (167 aa)    
Predicted Functional Partners:
EAR13963.1
Putative rod shape-determining protein MreC; COG1792 Cell shape-determining protein.
 
    0.821
EAR13965.1
COG0768 Cell division protein FtsI/penicillin-binding protein 2.
 
     0.814
EAR13966.1
Rod shape-determining protein rodA; COG0772 Bacterial cell division membrane protein; Belongs to the SEDS family.
       0.777
EAR13962.1
Putative rod-shape determining protein; COG1077 Actin-like ATPase involved in cell morphogenesis.
       0.723
EAR12864.1
Hypothetical protein.
  
     0.713
EAR13119.1
Cell division protein FtsQ.
  
     0.626
EAR12297.1
LysM-repeat proteins and domains; COG1388 FOG: LysM repeat.
  
     0.581
EAR13856.1
Hypothetical protein.
  
     0.579
EAR12805.1
Hypothetical protein.
  
     0.577
purH-2
Bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful).
       0.537
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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