STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR11502.1Hypothetical protein. (333 aa)    
Predicted Functional Partners:
EAR12835.1
4Fe-4S ferredoxin, iron-sulfur binding protein; COG1145 Ferredoxin.
   
   0.965
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.844
EAR13577.1
COG0236 Acyl carrier protein.
  
 0.844
EAR11500.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
 
     0.833
EAR11501.1
Lipopolysaccharide core biosynthesis mannosyltransferase; COG0438 Glycosyltransferase.
    
  0.800
EAR12322.1
Hypothetical protein; COG0702 Predicted nucleoside-diphosphate-sugar epimerases.
  
   0.775
EAR12844.1
Hypothetical protein; COG0702 Predicted nucleoside-diphosphate-sugar epimerases.
  
   0.775
EAR13712.1
Hypothetical protein; COG0666 FOG: Ankyrin repeat.
    
 
 0.708
EAR12849.1
Zinc-containing alcohol dehydrogenase superfamily protein; COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases.
    
 0.629
EAR12332.1
3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase/isomerase family protein; COG1250 3-hydroxyacyl-CoA dehydrogenase.
    
 0.625
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.