Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
icmFmethylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly. (1166 aa)    
Predicted Functional Partners:
EAR12300.1
COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit.
  
 0.999
EAR13050.1
Arginine/ornithine transport system ATPase; COG1703 Putative periplasmic protein kinase ArgK and related GTPases of G3E family.
 
0.989
EAR12301.1
COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit.
 
0.986
EAR12229.1
Large subunit of NADH-dependent glutamate synthase; COG0067 Glutamate synthase domain 1.
     
 0.902
EAR12084.1
Transcriptional regulator, MerR family protein; COG0789 Predicted transcriptional regulators.
 
  
 0.851
EAR13791.1
COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins.
    
 0.848
EAR13764.1
Acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
  
 
 0.788
EAR11783.1
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
    
 0.769
EAR13040.1
FAD linked oxidase-like protein; COG0277 FAD/FMN-containing dehydrogenases.
    
 0.762
EAR14007.1
Hypothetical protein; COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family.
     
  0.757
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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