STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR12239.1COG0810 Periplasmic protein TonB, links inner and outer membranes. (268 aa)    
Predicted Functional Partners:
EAR13225.1
Putative outer membrane protein probably involved in nutrient binding; COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
 
 0.999
EAR12238.1
Putative tansport related protein; COG0848 Biopolymer transport protein.
  
 
 0.962
EAR12237.1
COG0811 Biopolymer transport proteins.
 
 
 0.954
EAR13886.1
Hypothetical protein.
 
 
 0.940
EAR13887.1
Hypothetical protein.
 
 
 0.909
EAR13884.1
MotA/TolQ/ExbB proton channel family protein; COG0811 Biopolymer transport proteins.
 
 
 0.896
EAR11619.1
Hypothetical protein.
   
 
 0.890
EAR13428.1
OmpA family protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
   
 
 0.890
EAR11934.1
Putative TonB-dependent outer membrane receptor protein.
  
   0.856
EAR11720.1
Putative TonB-dependent receptor; COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
   0.822
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.