Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAR12263.1Hypothetical protein. (348 aa)    
Predicted Functional Partners:
EAR12264.1
Hypothetical protein; COG0778 Nitroreductase.
 
     0.862
EAR12262.1
Polysaccharide transport protein, putative; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid.
 
  
 0.843
EAR12265.1
Lipopolysaccharide N-acetylglucosaminyltransferase; COG0438 Glycosyltransferase.
  
 
 0.824
EAR12266.1
Putative glycosyltransferase HI1698; COG0438 Glycosyltransferase.
  
 
  0.770
EAR12261.1
Involved in lipopolysaccharide biosynthesis.
       0.726
gmd
GDP-D-mannose dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
  
 0.535
EAR12268.1
COG0381 UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
       0.512
EAR12267.1
Putative UDP-N-acetyl-D-mannosamine dehydrogenase; COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
       0.492
EAR12257.1
COG1596 Periplasmic protein involved in polysaccharide export.
  
  
 0.426
fcl
GDP-fucose synthetase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.
     
 0.411
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.