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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR12318.1COG0415 Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family. (496 aa)    
Predicted Functional Partners:
ung
uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.
 
      0.871
EAR12320.1
Probable bacterial cryptochrome; COG0415 Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family.
    
0.859
EAR12319.1
COG3046 Uncharacterized protein related to deoxyribodipyrimidine photolyase.
 
   
 0.854
EAR12317.1
Hypothetical protein; COG0107 Imidazoleglycerol-phosphate synthase.
 
     0.652
EAR12316.1
Hypothetical protein.
 
     0.644
EAR12324.1
ABC1 family protein; COG0661 Predicted unusual protein kinase.
 
     0.589
EAR12323.1
COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family.
 
     0.584
EAR12322.1
Hypothetical protein; COG0702 Predicted nucleoside-diphosphate-sugar epimerases.
       0.523
EAR12325.1
Hypothetical protein.
       0.523
EAR12308.1
TspO/MBR family protein; COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog).
 
  
 0.469
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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