Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
pdxHPyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). (215 aa)    
Predicted Functional Partners:
pdxJ
Pyridoxal phosphate biosynthetic protein; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.
     
 0.938
EAR12351.1
COG2062 Phosphohistidine phosphatase SixA.
       0.723
EAR12350.1
COG0248 Exopolyphosphatase.
       0.722
pyrB
COG0540 Aspartate carbamoyltransferase, catalytic chain; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
      0.663
EAR12923.1
Pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein; COG0259 Pyridoxamine-phosphate oxidase.
     
  0.659
EAR12189.1
COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ).
 
 
  
 0.586
EAR12353.1
COG2081 Predicted flavoproteins.
       0.580
EAR12354.1
Hypothetical protein.
       0.430
EAR12417.1
COG3871 Uncharacterized stress protein (general stress protein 26).
  
  
 0.411
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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