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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pyrBCOG0540 Aspartate carbamoyltransferase, catalytic chain; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. (309 aa)    
Predicted Functional Partners:
EAR13529.1
COG0044 Dihydroorotase and related cyclic amidohydrolases.
 0.999
EAR12189.1
COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ).
 
 0.999
carA
COG0505 Carbamoylphosphate synthase small subunit; Belongs to the CarA family.
 
 0.998
EAR12791.1
Amidohydrolase family, putative; COG0044 Dihydroorotase and related cyclic amidohydrolases.
 0.998
EAR11874.1
COG0044 Dihydroorotase and related cyclic amidohydrolases.
 0.998
EAR12434.1
COG2065 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase.
 
 
 0.986
EAR12894.1
COG2065 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase.
 
 
 0.956
pyrD
Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
 
 
 0.939
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
 
 0.917
EAR11518.1
COG0284 Orotidine-5'-phosphate decarboxylase.
  
  
 0.895
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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